Databases (56)

Salmonella enterica subsp. enterica serovar Typhi str. CT18 (genome)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/195/995/GCF_000195995.1_ASM19599v1/GCF_000195995.1_ASM19599v1_genomic.fna.gz

Last updated: 2017-11-01 07:19:53

Danio rerio genome+RNA (zebrafish´╝î assembly GRCz11)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/035/GCF_000002035.6_GRCz11/GCF_000002035.6_GRCz11_genomic.fna.gz

Last updated: 2017-10-30 05:52:32

Apis mellifera genome+RNA (honey bee, assembly Amel_4.5)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/195/GCF_000002195.4_Amel_4.5/GCF_000002195.4_Amel_4.5_genomic.fna.gz

Last updated: 2017-10-30 05:52:09

Danio rerio RNA (zebrafish´╝î assembly GRCz11)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/035/GCF_000002035.6_GRCz11/GCF_000002035.6_GRCz11_rna.fna.gz

Last updated: 2017-10-30 05:35:43

Danio rerio genome (zebrafish, assembly GRCz11)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/035/GCF_000002035.6_GRCz11/GCF_000002035.6_GRCz11_genomic.fna.gz

Last updated: 2017-10-30 05:35:14

Apis mellifera RNA (honey bee, assembly Amel_4.5)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/195/GCF_000002195.4_Amel_4.5/GCF_000002195.4_Amel_4.5_rna.fna.gz

Last updated: 2017-10-30 05:34:45

Apis mellifera genome (honey bee, assembly Amel_4.5)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/195/GCF_000002195.4_Amel_4.5/GCF_000002195.4_Amel_4.5_genomic.fna.gz

Last updated: 2017-10-30 05:34:07

Klebsiella pneumoniae subsp. pneumoniae HS11286 genome

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/240/185/GCF_000240185.1_ASM24018v2/GCF_000240185.1_ASM24018v2_genomic.fna.gz

Last updated: 2017-10-24 01:08:33

Crassostrea virginica genome + RNA (assembly C_virginica-3.0)

Last updated: 2017-10-12 04:29:00

Crassostrea virginica RNA (assembly C_virginica-3.0)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/022/765/GCF_002022765.2_C_virginica-3.0/GCF_002022765.2_C_virginica-3.0_rna.fna.gz

Last updated: 2017-10-12 04:27:52

Crassostrea virginica genome (assembly C_virginica-3.0)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/022/765/GCF_002022765.2_C_virginica-3.0/GCF_002022765.2_C_virginica-3.0_genomic.fna.gz

Last updated: 2017-10-12 04:27:20

Rattus norvegicus Genome + RNA (Norway rat, assembly Rnor_6.0)

Last updated: 2017-08-18 21:39:39

Rattus norvegicus RNA (Norway rat, assembly Rnor_6.0)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/895/GCF_000001895.5_Rnor_6.0/GCF_000001895.5_Rnor_6.0_rna.fna.gz

Last updated: 2017-08-14 00:32:09

UCSC - Rattus norvegicus - rn6 - Genome

Last updated: 2017-08-13 14:15:13

Drosophila melanogaster genome + RNA (fruit fly, assembly Release 6 plus ISO1 MT)

Last updated: 2017-08-09 01:02:10

Drosophila melanogaster genome (fruit fly, assembly Release 6 plus ISO1 MT)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/215/GCF_000001215.4_Release_6_plus_ISO1_MT/GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fna.gz

Last updated: 2017-08-09 01:01:12

Drosophila melanogaster RNA (fruit fly, assembly Release 6 plus ISO1 MT)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/215/GCF_000001215.4_Release_6_plus_ISO1_MT/GCF_000001215.4_Release_6_plus_ISO1_MT_rna.fna.gz

Last updated: 2017-08-08 15:56:42

Caenorhabditis elegans (assembly WBcel235) RNA

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/985/GCF_000002985.6_WBcel235/GCF_000002985.6_WBcel235_rna.fna.gz

Last updated: 2017-08-07 13:30:45

Riemerella anatipestifer representative genome

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/252/855/GCF_000252855.1_ASM25285v1/GCF_000252855.1_ASM25285v1_genomic.fna.gz

Last updated: 2017-08-07 05:56:46

Staphylococcus aureus subsp. aureus USA300_FPR3757, complete genome

https://www.ncbi.nlm.nih.gov/nuccore/NC_007793.1?report=fasta

Last updated: 2017-08-07 05:55:11

UCSC - C. elegans - ce11 - Genome

Feb. 2013 (WBcel235/ce11)

Last updated: 2017-08-07 05:48:12

Human GRCh 38 Genome + RNA

hg38.fa + interim_GRCh38.p10_rna.fa

Last updated: 2017-08-06 14:55:45

Human GRCh38 RNA

fasp://anonftp@ftp.ncbi.nlm.nih.gov:22/genomes/H_sapiens/GRCh38.p10_interim_annotation/interim_GRCh38.p10_rna.fa.gz

Last updated: 2017-08-06 14:55:31

UCSC - Homo sapiens - hg38 - Genome

Last updated: 2017-08-06 07:07:47

Archaea 16S (release 11)

https://rdp.cme.msu.edu/download/current_Archaea_unaligned.fa.gz

Last updated: 2017-08-05 16:20:36

Fragaria vesca v2.0.a1 pseudomolecules

Last updated: 2017-08-05 15:21:42

Rice Genome release 7

http://rice.plantbiology.msu.edu/pub/data/Eukaryotic_Projects/o_sativa/annotation_dbs/pseudomolecules/version_7.0/

Last updated: 2017-08-05 09:40:00

Prunus persica v2.0.a1 scaffolds

Last updated: 2017-08-05 07:28:56

UNITE public 22.08.2016

Last updated: 2017-08-05 01:45:53

Phaseolus vulgaris v2.1 genome

http://genome.jgi.doe.gov/pages/dynamicOrganismDownload.jsf?organism=Pvulgaris

Last updated: 2017-08-04 20:05:04

Potato Genome Sequence (DM_v4.04_pseudomolecules)

http://solanaceae.plantbiology.msu.edu/pgsc_download.shtml

Last updated: 2017-08-04 15:13:42

Pseudomonas Genomic DNA (pgd_r_16_2)

http://www.pseudomonas.com/strain/download

Last updated: 2017-08-04 06:50:24

Zea mays (AGPv4)

http://www.maizegdb.org/; http://ensembl.gramene.org/Zea_mays/Info/Index

Last updated: 2017-08-04 02:14:28

Arabidopsis thaliana Genome (TAIR10)

https://www.araport.org/downloads/TAIR10_genome_release

Last updated: 2017-08-03 15:41:59

Arabidopsis thaliana coding sequences (Araport11)

https://www.araport.org/download_file/Araport11_Release_201606/annotation/Araport11_genes.201606.cdna.fasta.gz

Last updated: 2017-08-03 14:57:11

Virus genome (EBI)

http://www.ebi.ac.uk/genomes/virus.html

Last updated: 2017-08-03 09:05:05

Phaseolus vulgaris v2.1 transcript

http://genome.jgi.doe.gov/pages/dynamicOrganismDownload.jsf?organism=Pvulgaris

Last updated: 2017-08-03 08:26:28

UNITE Includes global and 97% singletons (version 7.1)

https://unite.ut.ee/sh_files/sh_general_release_s_20.11.2016.zip

Last updated: 2017-08-03 07:51:36

UNITE Includes singletons set as RefS (version 7.1)

https://unite.ut.ee/sh_files/sh_general_release_20.11.2016.zip

Last updated: 2017-08-03 07:17:19

Mycobacterium tuberculosis H37Rv, complete genome

https://www.ncbi.nlm.nih.gov/nuccore/NC_000962.3

Last updated: 2017-08-03 06:05:44

HPV (human papillomavirus reference genomes)

https://pave.niaid.nih.gov/#explore/reference_genomes/human_genomes (2017.3.6)

Last updated: 2017-08-03 06:04:03

HOMD 16S rRNA RefSeq V13.2

Last updated: 2017-08-03 06:02:30

HBV

https://www.ncbi.nlm.nih.gov/nuccore ("Hepatitis B virus"[Organism] OR HBV[All Fields]) AND "Hepatitis B virus"[porgn]

Last updated: 2017-08-03 05:43:58

Sus scrofa (pig) Sscrofa11.1 Genome + RNA

https://www.ncbi.nlm.nih.gov/genome/?term=pig

Last updated: 2017-08-03 05:09:39

Sus scrofa (pig) RNA Sscrofa11.1

https://www.ncbi.nlm.nih.gov/genome/?term=pig

Last updated: 2017-08-03 05:07:18

Sus scrofa (pig) representative genome Sscrofa11.1

https://www.ncbi.nlm.nih.gov/genome/?term=pig

Last updated: 2017-08-03 02:53:21

Mouse GRCm38 Genome + RNA

mm10.fa + M_musculus_38.rna.fa

Last updated: 2017-08-02 15:54:41

UCSC - Mus musculus - mm10 - Genome

Last updated: 2017-08-02 15:52:33

Mouse GRCm38 RNA

fasp://anonftp@ftp.ncbi.nlm.nih.gov:22/genomes/M_musculus/RNA/rna.fa.gz

Last updated: 2017-08-02 03:37:23

SILVA-NR99 type strains

https://www.arb-silva.de/

Last updated: 2017-08-02 02:44:14

Pantodon buchholzi mitochondrial DNA, complete genome

https://www.ncbi.nlm.nih.gov/nuccore/15430523?report=fasta, AB043068.1

Last updated: 2017-08-02 02:07:29

Saccharomyces cerevisiae S288C (assembly R64) (reference genome)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/045/GCF_000146045.2_R64/GCF_000146045.2_R64_genomic.fna.gz

Last updated: 2017-08-02 02:06:29

Escherichia coli str. K-12 substr. MG1655 (reference genome)

ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/845/GCF_000005845.2_ASM584v2/GCF_000005845.2_ASM584v2_genomic.fna.gz

Last updated: 2017-08-02 01:39:02

Human GRCh 37 Genome + RNA

hg19.fa + interim_GRCh37.p13_rna.fa

Last updated: 2017-08-02 01:07:29

Human genome (hg19, GRCh37)

Last updated: 2017-08-02 01:06:35

Human GRCh37 RNA

fasp://anonftp@ftp.ncbi.nlm.nih.gov:22/genomes/H_sapiens/GRCh37.p13_interim_annotation/interim_GRCh37.p13_rna.fa.gz

Last updated: 2017-08-01 03:43:46